Group | Phenotype | Population | Cases | Controls | Families | Trios |
---|---|---|---|---|---|---|
Discovery | BD | 1868 | - | - | - | |
Discovery | CAD | 1926 | - | - | - | |
Discovery | CRO | 1748 | - | - | - | |
Discovery | HT | 1952 | - | - | - | |
Discovery | NULL | - | 2938 | - | - | |
Discovery | RA | 1860 | - | - | - | |
Discovery | T1D | 1963 | - | - | - | |
Discovery | T2D | 1924 | - | - | - |
Region | Location | Gene(s) | Marker | Allele | MAF | P Value | Odds Ratio |
---|---|---|---|---|---|---|---|
1p13.2 | chr1:113288123-114002809 | rs6679677 | C > A | 0.096 | 5.55e-25D | 1.98 (1.72-2.27)D | |
1p13.2 | chr1:113288123-114002809 | rs6679677 | C > A | 0.096 | 5.55e-25D | 1.98 (1.72-2.27)D | |
1p31.3 | chr1:67128876-67302310 | rs11805303 | C > T | 0.317 | 5.85e-12D | 1.39 (1.22-1.58)D | |
1p36.32 | chr1:2431888-2880054 | rs6684865 | G > A | 0.338 | 3.14e-05D | 1.27 (1.02-1.56)D | |
1q24.3 | chr1:172742823-172975611 | rs12037606 | G > A | 0.388 | 1.09e-05D | 1.22 (1.07-1.40)D | |
1q42.12 | chr1:225366293-225775963 | rs2639703 | T > C | 0.276 | 1.74e-05D | 1.15 (1.02-1.30)D | |
2q37.1 | chr2:233232538-233670717 | rs10210302 | T > C | 0.481 | 5.26e-14D | 1.19 (1.01-1.41)D | |
3p21.31 | chr3:48414698-50711580 | rs9858542 | G > A | 0.282 | 3.58e-08D | 1.09 (0.96-1.24)D | |
4p15.2 | chr4:25109041-25455580 | rs3816587 | T > C | 0.406 | 9.25e-06D | 1.1 (0.96-1.25)D | |
4q27 | chr4:122017479-122644147 | rs6534347 | G > A | 0.351 | 1.83e-06D | 1.30 (1.10-1.55)D | |
4q27 | chr4:122041392-122644147 | rs17388568 | G > A | 0.260 | 3.27e-06D | 1.26 (1.11-1.42)D | |
5p13.1 | chr5:40286865-40626651 | rs17234657 | T > G | 0.125 | 1.99e-12D | 1.54 (1.34-1.76)D | |
5q14.3 | chr5:86836103-87169922 | rs2544677 | C > G | 0.242 | 4.43e-05D | 1.33 (1.0-1.79)D | |
5q31.1 | chr5:132066493-132645156 | rs6596075 | C > G | 0.166 | 3.19e-06D | 1.54 (1.0-2.38)D | |
5q31.1 | chr5:133276293-133329832 | rs17166496 | C > G | 0.391 | 5.20e-06D | 1.30 (1.15-1.47)D | |
5q33.1 | chr5:150658703-151012930 | rs1000113 | c > T | 0.067 | 3.15e-07D | 1.54 (1.31-1.82)D | |
6p22.3 | chr6:20522059-20919892 | rs6908425 | C > T | 0.230 | 1.10e-05D | 1.64 (1.18-2.27)D | |
6q23.3 | chr6:137636199-137927704 | rs7753394 | T > C | 0.482 | 2.59e-05D | 1.21 (1.04-1.40)D | |
6q23.3 | chr6:137568592-137806067 | rs6920220 | G > A | 0.223 | 1.58e-05D | 1.20 (1.06-1.36)D | |
7q32.3 | chr7:131651764-131698797 | rs11761231 | G > A | 0.375 | 1.37e-06D | 1.45 (1.19-1.75)D | |
7q36.1 | chr7:148487312-148564440 | rs7807268 | C > G | 0.462 | 4.42e-06D | 1.38 (1.20-1.60)D | |
10p15.1 | chr10:5988280-6129961 | rs2104286 | T > C | 0.286 | 4.32e-05D | 1.3 (1.02-1.64)D | |
10p15.1 | chr10:5988280-6129961 | rs2104286 | T > C | 0.286 | 4.32e-05D | 1.3 (1.02-1.64)D | |
10p15.1 | chr10:3818510-3825864 | rs6601764 | T > C | 0.408 | 8.95e-06D | 1.16 (1.01-1.33)D | |
10q21.2 | chr10:62581266-62866159 | rs10761659 | G > A | 0.461 | 1.75e-06D | 1.23 (1.05-1.45)D | |
10q24.2 | chr10:99508770-99570210 | rs10883365 | A > G | 0.477 | 5.82e-08D | 1.20 (1.03-1.39)D | |
12p13.31 | chr12:9347245-9815492 | rs11052552 | G > T | 0.486 | 7.24e-07D | 1.49 (1.28-1.72)D | |
12p13.31 | chr12:9343806-9813007 | rs3764021 | G > T | 0.467 | 5.08e-08D | 1.56 (1.39-1.79)D | |
12q13.2 | chr12:55958153-56398232 | rs11171739 | T > C | 0.423 | 9.71e-11D | 1.34 (1.17-1.54)D | |
12q24.13 | chr12:111299311-112592683 | rs17696736 | A > G | 0.424 | 1.51e-14D | 1.34 (1.16-1.53)D | |
13q12.11 | chr13:20347851-20386207 | rs9550642 | G > A | 0.084 | 3.90e-05D | 1.34 (1.15-1.56)D | |
16p13.13 | chr16:10923201-11218316 | rs12708716 | A > G | 0.350 | 4.92e-07D | 1.19 (0.97-1.45)D | |
16q12.1 | chr16:50655913-50822931 | rs17221417 | C > G | 0.287 | 3.98e-11D | 1.29 (1.13-1.46)D | |
18p11.21 | chr18:12738414-12925254 | rs2542151 | T > G | 0.163 | 1.16e-05D | 1.30 (1.15-1.47)D | |
18p11.21 | chr18:12738414-12925254 | rs2542151 | T > G | 0.163 | 1.16e-05D | 1.30 (1.15-1.47)D | |
19q13.32 | chr19:45641767-45922818 | rs8111071 | A > G | 0.070 | 1.75e-05D | 1.47 (1.25-1.73)D | |
21q22.2 | chr21:41122022-41174890 | rs2837960 | T > G | 0.171 | 1.68e-06D | 1.05 (0.93-1.2)D | |
22q12.3 | chr22:37142468-37166071 | rs743777 | A > G | 0.292 | 1.15e-06D | 1.09 (0.97-1.24)D | |
MHC | chr6:32414162-32714887 | rs9272346 | A > G | 0.387 | 5.47e-134D | 5.56 (4.76-6.25)D | |
MHC | chr6:32480784-32727855 | rs6457617 | C > T | 0.489 | 5.18e-75D | 2.36 (1.97-2.84)D | |
MHC | chr6:32463928-32718134 | rs9469220 | G > A | 0.481 | 2.28e-06D | 1.14 (0.98-1.32)D |