Overview

IDAllelesLocationGenome BuildSource
rs9469220G/Achr6: 3269053338dbsnp146
rs9469220G/A chr6: 32658310 37dbsnp146_grch37

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Historical Ids

Old Marker IDNew Marker IDCurrent Marker IDdbSNP Build
rs112132255rs9469220rs9469220135
rs111180727rs9469220rs9469220142
rs116109017rs9469220rs9469220136
rs34813133rs9469220rs9469220127
rs112389561rs9469220rs9469220135
rs113310544rs9469220rs9469220135
rs118175757rs116109017rs9469220132
rs56470654rs9469220rs9469220130
rs57948952rs9469220rs9469220130

Criteria

rs9469220 meets the following criteria:

Criteria Name
Details
Disease Tags
Marker is an index SNP in a Region 

Functional Information

Gene function properties for rs9469220 as derived from dbSNP:

    Study

    Studies containing regions of association that span this marker are shown below. Please note that when making comparisons across studies, that they may vary in terms of size, genotyping platform, and exclusion criteria. If the 'Odds Ratio' is less than 1 then the region is protective (alleles are marked as blue) otherwise it is susceptible (alleles marked as red).

    StudyPublicationDiseaseRegionMarkerAllelesP-valueORMAFGene(s)

    Populations

    Populations data from Ensembl 1000 Genome data release May 2013:

    Linkage Disequilibrium Statistics

    LD Search Options

    Linkage disequilibrium (LD) statistics are calculated for rs9469220, using the 1000 genomes data release May 2013. Calculations are performed with the snpStats R library, covering 1Mb either side of the marker; and with the following filters applied: MAF > 0.01, call rate < 0.9, and chi-squared test for deviation from HWE > 25.